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Segmentation of nasopharyngeal neoplasms based on random forest feature selection algorithm
LI Xian, WANG Yan, LUO Yong, ZHOU Jiliu
Journal of Computer Applications    2019, 39 (5): 1485-1489.   DOI: 10.11772/j.issn.1001-9081.2018102205
Abstract391)      PDF (796KB)(345)       Save
Due to the low grey-level contrast and blurred boundaries of organs in medical images, a Random Forest (RF) feature selection algorithm was proposed to segment nasopharyngeal neoplasms MR images. Firstly, gray-level, texture and geometry information was extracted from nasopharyngeal neoplasms images to construct a random forest classifier. Then, feature importances were measured by the random forest, and the proposed feature selection method was applied to the original handcrafted feature set. Finally, the optimal feature subset obtained from the feature selection process was used to construct a new random forest classifier to make the final segmentation of the images. Experimental results show that the performances of the proposed algorithm are:dice coefficient 79.197%, accuracy 97.702%, sensitivity 72.191%, and specificity 99.502%. By comparing with the conventional random forest based and Deep Convolution Neural Network (DCNN) based segmentation algorithms, it is clearly that the proposed feature selection algorithm can effectively extract useful information from the nasopharyngeal neoplasms MR images and improve the segmentation accuracy of nasopharyngeal neoplasms under small sample circumstance.
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Automatic segmentation of nasopharyngeal neoplasm in MR image based on U-net model
PAN Peike, WANG Yan, LUO Yong, ZHOU Jiliu
Journal of Computer Applications    2019, 39 (4): 1183-1188.   DOI: 10.11772/j.issn.1001-9081.2018091908
Abstract432)      PDF (970KB)(323)       Save
Because of the uncertain growth direction and complex anatomical structure for nasopharyngeal tumors, doctors always manually delineate the tumor regions in MR images, which is time-consuming and the delineation result heavily depends on the experience of doctors. In order to solve this problem, based on deep learning algorithm, a U-net based MR image automatic segmentation algorithm of nasopharyngeal tumors was proposed, in which the max-pooling operation in original U-net model was replaced by the convolution operation to keep more feature information. Firstly,the regions of 128×128 were extracted from all slices with tumor regions of the patients as data samples. Secondly, the patient samples were divided into training sample set and testing sample set, and data augmentation was performed on the training samples. Finally, all the training samples were used to train the model. To evaluate the performance of the proposed U-net based model, all slices of patients in testing sample set were selected for segmentation, and the final average results are:Dice Similarity Coefficient (DSC) is 80.05%, Prevent Match (PM) coefficient is 85.7%, Correspondence Ratio (CR) coefficient is 71.26% and Average Symmetric Surface Distance (ASSD) is 1.1568. Compared with Convolutional Neural Network (CNN) based model, DSC, PM and CR coefficients of the proposed method are increased by 9.86 percentage points, 19.61 percentage points and 16.02 percentage points respectively, and ASSD is decreased by 0.4364. Compared with Fully Convolutional Network (FCN) model and max-pooling based U-net model, DSC and CR coefficients of the proposed method achieve the best results, while PM coefficient is 2.55 percentage points lower than the maximum value in the two comparison models, and ASSD is slightly higher than the minimum value of the two comparison models by 0.0046. The experimental results show that the proposed model can achieve good segmentation results of nasopharyngeal neoplasm, which assists doctors in diagnosis.
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Improving ideal low-pass filter with noise detection algorithm
YANG Zhuzhong ZHOU Jiliu LANG Fangnian
Journal of Computer Applications    2014, 34 (10): 2971-2975.   DOI: 10.11772/j.issn.1001-9081.2014.10.2971
Abstract448)      PDF (799KB)(458)       Save

For the contradiction between filtering noise and preserving image detail in image denoising algorithms, a random noise detection algorithm based on fractional differential gradient, was proposed to improve denoising performance of the ideal low-pass filter in this paper. Firstly, the fractional differential gradient templates of different directions were used to convolve with noisy images, and calculate fractional differential gradients in different directions. Then according to a pre-set threshold value, the fractional differential gradient detection figures in different directions could be obtained. If the pixel gradients occurred hopping in all selected directions, and this pixel was determined to be a noise pixel. Finally, only the detected noise pixels were processed by ideal low-pass filter. The denoised image could get a better effect of removing the noise and preserving image detail at the same time. The experimental results show that the proposed algorithm can get a better visual effect, the Peak Signal-to-Noise Ratio (PSNR) of denoised image indicates the denoised image is more closer to the original image: The maximum PSNR by using the ideal low-pass filter is 29.0893dB, meanwhile the maximum PSNR obtained by the proposed algorithm is 34.7027dB. It is an exploration of fractional calculus for image denoising, and provides a new research direction to improve performance of image denoising.

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